- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | spu-mir-2001 | mir-2001 | spu-miR-2001 | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 5/6 | 2/7 |
2 | spu-mir-182 | mir-182 | spu-miR-182 | 25/25 | N/A | N/A | 10-34 | N/A | - | miRBase_13_0 | 18/34 | 2/50 |
3 | spu-mir-96 | mir-96 | spu-miR-96 | 21/21 | N/A | N/A | 10-30 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
4 | spu-mir-183 | mir-183 | spu-miR-183 | 22/22 | N/A | N/A | 12-33 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
5 | spu-mir-2012 | mir-2012 | spu-miR-2012 | 22/22 | N/A | N/A | 12-33 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
6 | spu-mir-2003 | mir-2003 | spu-miR-2003 | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 1/1 | 2/2 |
7 | spu-mir-2007 | mir-2007 | spu-miR-2007 | 23/23 | N/A | N/A | 15-37 | N/A | - | miRBase_13_0 | 1/1 | 3/3 |
8 | spu-mir-7 | mir-7 | spu-miR-7 | 23/23 | N/A | N/A | 17-39 | N/A | - | miRBase_13_0 | 46/63 | 3/143 |
9 | spu-mir-31 | mir-31 | spu-miR-31 | 21/21 | N/A | N/A | 19-39 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
10 | spu-mir-252a | mir-252 | spu-miR-252a | 22/22 | N/A | N/A | 20-41 | N/A | - | miRBase_13_0 | 10/22 | 3/31 |
11 | spu-mir-242 | mir-242 | spu-miR-242 | 22/22 | N/A | N/A | 20-41 | N/A | - | miRBase_13_0 | 7/7 | 1/10 |
12 | spu-mir-34 | mir-34 | spu-miR-34 | 22/22 | N/A | N/A | 21-42 | N/A | - | miRBase_13_0 | 45/67 | 2/144 |
13 | spu-mir-219 | mir-219 | spu-miR-219 | 23/23 | N/A | N/A | 21-43 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
14 | spu-mir-33 | mir-33 | spu-miR-33 | 22/22 | N/A | N/A | 21-42 | N/A | - | miRBase_13_0 | 34/54 | 2/96 |
15 | spu-mir-9 | mir-9 | spu-miR-9 | 22/22 | N/A | N/A | 21-42 | N/A | - | miRBase_13_0 | 41/59 | 2/206 |
16 | spu-let-7 | let-7 | spu-let-7 | 22/22 | N/A | N/A | 21-42 | N/A | - | miRBase_13_0 | 44/65 | 1/337 |
17 | spu-mir-252b | mir-252 | spu-miR-252b | 22/22 | N/A | N/A | 21-42 | N/A | - | miRBase_13_0 | 10/22 | 3/31 |
18 | spu-mir-71 | mir-71 | spu-miR-71 | 23/23 | N/A | N/A | 22-44 | N/A | - | miRBase_13_0 | 13/17 | 2/25 |
19 | spu-mir-125 | mir-125 | spu-miR-125 | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 45/62 | 2/195 |
20 | spu-mir-2005 | mir-2005 | spu-miR-2005 | 24/24 | N/A | N/A | 22-45 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
21 | spu-mir-10 | mir-10 | spu-miR-10 | 23/23 | N/A | N/A | 26-48 | N/A | - | miRBase_13_0 | 43/59 | 1/124 |
22 | spu-mir-200 | mir-200 | spu-miR-200 | 23/23 | N/A | N/A | 47-69 | N/A | - | miRBase_13_0 | 21/37 | 2/88 |
23 | spu-mir-137 | mir-137 | spu-miR-137 | 22/22 | N/A | N/A | 47-68 | N/A | - | miRBase_13_0 | 24/47 | 2/69 |
24 | spu-mir-210 | mir-210 | spu-miR-210 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 33/43 | 1/62 |
25 | spu-mir-2010 | mir-2010 | spu-miR-2010 | 22/22 | N/A | N/A | 53-74 | N/A | - | miRBase_13_0 | 1/2 | 2/3 |
26 | spu-mir-2008 | mir-2008 | spu-miR-2008 | 21/21 | N/A | N/A | 56-76 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
27 | spu-mir-2002 | mir-2002 | spu-miR-2002 | 23/23 | N/A | N/A | 59-81 | N/A | - | miRBase_13_0 | 1/1 | 2/2 |
28 | spu-mir-22 | mir-22 | spu-miR-22 | 22/22 | N/A | N/A | 60-81 | N/A | - | miRBase_13_0 | 23/37 | 1/51 |
29 | spu-mir-2011 | mir-2011 | spu-miR-2011 | 22/22 | N/A | N/A | 60-81 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
30 | spu-mir-1 | mir-1 | spu-miR-1 | 22/22 | N/A | N/A | 60-81 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
31 | spu-mir-133 | mir-133 | spu-miR-133 | 23/23 | N/A | N/A | 60-82 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
32 | spu-mir-79 | mir-79 | spu-miR-79 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 22/28 | 1/45 |
33 | spu-mir-2009 | mir-2009 | spu-miR-2009 | 23/23 | N/A | N/A | 61-83 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
34 | spu-mir-2004 | mir-2004 | spu-miR-2004 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 1/1 | 2/2 |
35 | spu-mir-2013 | mir-2013 | spu-miR-2013 | 21/21 | N/A | N/A | 61-81 | N/A | - | miRBase_13_0 | 3/3 | 2/4 |
36 | spu-mir-278 | mir-278 | spu-miR-278 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 21/21 | 1/26 |
37 | spu-mir-184 | mir-184 | spu-miR-184 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 40/54 | 1/73 |
38 | spu-mir-153 | mir-153 | spu-miR-153 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
39 | spu-mir-124 | mir-124 | spu-miR-124 | 21/21 | N/A | N/A | 61-81 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
40 | spu-mir-92c | mir-92 | spu-miR-92c | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 5/170 |
41 | spu-mir-92b | mir-92 | spu-miR-92b | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 5/170 |
42 | spu-mir-92a | mir-92 | spu-miR-92a | 23/23 | N/A | N/A | 61-83 | N/A | - | miRBase_13_0 | 47/65 | 5/170 |
43 | spu-mir-29 | mir-29 | spu-miR-29 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 28/46 | 1/165 |
44 | spu-mir-2006 | mir-2006 | spu-miR-2006 | 22/22 | N/A | N/A | 62-83 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
45 | spu-mir-375 | mir-375 | spu-miR-375 | 22/22 | N/A | N/A | 62-83 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
Total | 45 record(s). |